entity¶
This section is auto-generated from the help text for the tripaille command
entity
.
add_entity
command¶
Usage:
tripaille entity add_entity [OPTIONS] ENTITY
Help
Add a new entity to the database
Output
Entity information
Options:
--params TEXT Values to populate the entity fields
-h, --help Show this message and exit.
get_bundles
command¶
Usage:
tripaille entity get_bundles [OPTIONS]
Help
Get the list of tripal bundles
Output
Bundles information
Options:
-h, --help Show this message and exit.
get_entities
command¶
Usage:
tripaille entity get_entities [OPTIONS]
Help
Get entities
Output
Entity information
Options:
--entity TEXT Name of the entity type (e.g. Organism)
--entity_id INTEGER ID of an entity
-h, --help Show this message and exit.
get_fields
command¶
Usage:
tripaille entity get_fields [OPTIONS] ENTITY
Help
Get the list of available fields for an entity
Output
Fields information
Options:
-h, --help Show this message and exit.
publish
command¶
Usage:
tripaille entity publish [OPTIONS]
Help
Publish entities (Tripal 3 only)
Output
status
Options:
--types TEXT List of entity types to be published (e.g. Gene mRNA,
default: all)
--job_name TEXT Name of the job
--no_wait Return immediately without waiting for job completion
-h, --help Show this message and exit.