tripal.feature package¶

Module contents¶

class tripal.feature.FeatureClient(tripalinstance, **requestArgs)¶

Manage Tripal features

delete_orphans(job_name=None, no_wait=None)¶

Delete orphans Drupal feature nodes

Parameters:	job_name (str) – Name of the job no_wait (bool) – Return immediately without waiting for job completion
Return type:	str
Returns:	status

get_features(feature_id=None)¶

Get features entities

Parameters:	feature_id (int) – A feature entity/node ID
Return type:	list of dict
Returns:	Feature entity/node information

get_features_tripal(feature_id=None)¶

Get features entities

Parameters:	feature_id (int) – A feature entity/node ID
Return type:	list of dict
Returns:	Feature entity/node information

sync(organism=None, organism_id=None, max_sync=u'', types=[], ids=[], job_name=None, no_wait=None)¶

Synchronize some features (Tripal 2 only)

Parameters:	organism (str) – Common name of the organism to sync organism_id (str) – ID of the organism to sync max_sync (str) – Maximum number of features to sync (default: all) types (list of str) – List of types of records to be synced (e.g. gene mRNA, default: all) ids (list of str) – List of names of records to be synced (e.g. gene0001, default: all) job_name (str) – Name of the job no_wait (bool) – Return immediately without waiting for job completion
Return type:	str
Returns:	status